PPDB

 The Plant Proteome Database

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AT4G08540.1   DNA-directed RNA polymerase II protein
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G77890.1 11Arabidopsis thaliana1E-13144948670 (0)_
AT1G77890.5 11Arabidopsis thaliana1E-13144948670 (0)_
AT1G77890.3 11Arabidopsis thaliana9E-13044948670 (0)_
Os07g43322.1 7Oryza sativa9E-14047748620 (0)C
Os07g43322.2 7Oryza sativa5E-12938852670 (0)C
v1_GRMZM2G382106_P03 4a53Zea mays3E-13748646610 (0)C
Zm00001eb327970_P003 agpv5Zea mays3E-13748646610 (0)C
GRMZM2G382106_P03 3.21Zea mays3E-13748646610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AKNA(1) Atg14(1) UPF0184(2)
TargetP: Chloroplast (Class 5 C0.380; M0.133; S0.075; _0.288)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 473 aa (-cTP 462)
Molecular Weight 53.14 kDA(-cTP 51.95)
PI 9.37(-cTP 9.35)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help