PPDB

The Plant Proteome Database

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AT4G08460.1   hypothetical protein (DUF1644)

Lab Annot. Protein of unknown function (DUF1644)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G08460.4 11Arabidopsis thaliana02741001000 (0)_
AT4G08460.3 11Arabidopsis thaliana02741001000 (0)_
AT4G08460.2 11Arabidopsis thaliana02741001000 (0)_
Os02g35840.1 7Oryza sativa1E-6920751650 (0)M
Os04g37530.1 7Oryza sativa8E-6821946640 (0)M
Os02g53110.2 7Oryza sativa3E-6619949650 (0)M
Zm00001eb182660_P001 agpv5Zea mays4E-7025745570 (0)M
Zm00001eb182660_P002 agpv5Zea mays4E-7025745570 (0)M
GRMZM2G022694_P01 3.21Zea mays4E-7025745570 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1644(2) HMG_box(2) zf-C3HC4_3(1) zf-Di19(3) zf-RING_2(1)
TargetP: Cytoplasm (Class 5 C0.103; M0.451; S0.015; _0.578)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 274 aa (-cTP 256)
Molecular Weight 31.30 kDA(-cTP )
PI 9.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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