PPDB

The Plant Proteome Database

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AT4G08330.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G08330.2 11Arabidopsis thaliana7E-10816493931 (1)C
AT2G17705.1 11Arabidopsis thaliana3E-1012828450 (0)_
Os01g61680.1 7Oryza sativa4E-4114450620 (0)_
Os05g39060.1 7Oryza sativa1E-4013953660 (0)M
Os05g03590.1 7Oryza sativa1E-1014233470 (0)_
Zm00001eb289950_P001 agpv5Zea mays1E-3913151680 (0)_
GRMZM2G064679_P01 3.21Zea mays3E-3713151680 (0)_
v1_GRMZM2G064679_P01 4a53Zea mays3E-3713151680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HNH_5(2) RNA_POL_M_15KD(2) zinc_ribbon_10(2)
TargetP: Chloroplast (Class 2 C0.829; M0.146; S0.008; _0.122)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 104)
Molecular Weight 18.21 kDA(-cTP 11.87)
PI 9.45(-cTP 9.62)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help