PPDB

PPDB	The Plant Proteome Database

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AT4G08210.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G13600.1 11 Arabidopsis thaliana 5E-114 597 33 53 0 (0) _
AT3G09040.1 11 Arabidopsis thaliana 3E-110 681 32 52 0 (0) M
AT3G09040.4 11 Arabidopsis thaliana 3E-110 681 32 52 0 (0) M
Os01g25270.1 7 Oryza sativa 1E-119 665 33 53 0 (0) M
Os09g07780.1 7 Oryza sativa 1E-117 665 33 52 0 (0) M
Os12g36620.1 7 Oryza sativa 3E-117 684 32 51 0 (0) _
v1_GRMZM2G163396_P01 4a53 Zea mays 4E-120 670 32 53 0 (0) M
Zm00001eb183560_P001 agpv5 Zea mays 4E-120 670 32 53 0 (0) M
GRMZM2G163396_P01 3.21 Zea mays 4E-120 670 32 53 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(16) PPR_1(11) PPR_2(12) PPR_3(9) PPR_long(4) RNPP_C(3) TPR_1(2) TPR_12(4) TP
TargetP:	Cytoplasm (Class 5 C0.060; M0.370; S0.055; _0.471)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	686 aa (-cTP 609)
Molecular Weight	75.82 kDA(-cTP )
PI	5.97(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data