PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G08140.1   26S proteasome non-ATPase regulatory subunit-like protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20580.1 11Arabidopsis thaliana9E-37709195458 (295)_
AT4G28470.1 11Arabidopsis thaliana3E-2970778571 (45)_
Os09g15750.1 7Oryza sativa9E-2969768620 (20)_
Os06g48640.2 7Oryza sativa1E-2869768818 (18)_
Os06g48640.3 7Oryza sativa2E-2869768811 (11)_
v1_GRMZM2G155384_P01 4a53Zea mays1E-2769738642 (42)_
GRMZM2G155384_P01 3.21Zea mays1E-2769738664 (51)_
Zm00001eb208050_P001 agpv5Zea mays1E-276973860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RPN1_RPN2_N(1)
TargetP: Cytoplasm (Class 5 C0.489; M0.073; S0.020; _0.672)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 84 aa (-cTP 38)
Molecular Weight 9.76 kDA(-cTP )
PI 9.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help