PPDB

PPDB	The Plant Proteome Database

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AT4G07400.1 VIER F-box protein 3

Lab Annot.

E3 F-box ligase - VIER F-box protein 3 (VFB3) also Fbl8/Fbl24 . Cytosolic likely. Defense response. Pubmed: 18375657
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G47056.1 11 Arabidopsis thaliana 0 518 58 71 0 (0) C
AT5G67250.1 11 Arabidopsis thaliana 0 479 58 72 0 (0) _
AT3G50080.1 11 Arabidopsis thaliana 2E-165 511 53 68 0 (0) _
Os04g42670.1 7 Oryza sativa 3E-128 486 45 62 0 (0) C
Os03g45910.1 7 Oryza sativa 4E-17 136 38 52 0 (0) _
Os11g42160.1 7 Oryza sativa 2E-16 346 28 43 0 (0) _
Zm00001eb078000_P004 agpv5 Zea mays 2E-129 443 48 65 0 (0) C
GRMZM2G045820_P01 3.21 Zea mays 2E-129 443 48 65 0 (0) C
v1_GRMZM2G045820_P01 4a53 Zea mays 2E-129 443 48 65 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(1) F-box-like(1) F-box_5(1) LRR_4(4) LRR_6(5)
TargetP:	Cytoplasm (Class 5 C0.518; M0.092; S0.008; _0.524)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	554 aa (-cTP 493)
Molecular Weight	61.00 kDA(-cTP )
PI	9.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data