PPDB

The Plant Proteome Database

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AT4G06599.1   ubiquitin family protein

Lab Annot. ubiquitin protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g65450.2 7Oryza sativa2E-16931969820 (0)_
Os01g65450.1 7Oryza sativa6E-16931969820 (0)S
GRMZM2G114172_P01 3.21Zea mays2E-16431968820 (0)S
GRMZM2G114172_P02 3.21Zea mays2E-16431968820 (0)S
v1_GRMZM2G114172_P02 4a53Zea mays2E-16431968820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NIF(1) ubiquitin(1) Ubiquitin_2(1)
TargetP: Chloroplast (Class 5 C0.611; M0.030; S0.286; _0.519)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 340 aa (-cTP 329)
Molecular Weight 38.96 kDA(-cTP 37.94)
PI 6.35(-cTP 6.39)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2287Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


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