PPDB

The Plant Proteome Database

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AT4G05497.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05460.1 11Arabidopsis thaliana1E-8624458730 (0)C
AT4G05475.1 11Arabidopsis thaliana3E-7724851690 (0)_
AT4G05470.1 11Arabidopsis thaliana7E-7424949660 (0)_
Os02g21240.1 7Oryza sativa4E-3823434540 (0)_
Os02g21260.1 7Oryza sativa1E-3523135530 (0)_
Os08g09450.1 7Oryza sativa3E-3323636560 (0)C
GRMZM2G002427_P01 3.21Zea mays4E-4024935530 (0)_
Zm00001eb354560_P001 agpv5Zea mays4E-4024935530 (0)_
v1_GRMZM2G002427_P01 4a53Zea mays4E-4024935530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(2) F-box-like(1) Gypsy(1) LRR_4(3) LRR_6(4)
TargetP: Chloroplast (Class 5 C0.591; M0.114; S0.015; _0.525)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 246 aa (-cTP 235)
Molecular Weight 27.44 kDA(-cTP 26.31)
PI 7.98(-cTP 8.05)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help