PPDB

The Plant Proteome Database

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AT4G05490.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05460.1 11Arabidopsis thaliana2E-9431253650 (0)C
AT4G05475.1 11Arabidopsis thaliana7E-8727652690 (0)_
AT4G05470.1 11Arabidopsis thaliana2E-8026351680 (0)_
Os02g21240.1 7Oryza sativa1E-5227137580 (0)_
Os02g21260.1 7Oryza sativa2E-4826040560 (0)_
Os08g09450.1 7Oryza sativa8E-4028538540 (0)C
GRMZM2G002427_P01 3.21Zea mays1E-5527940550 (0)_
Zm00001eb354560_P001 agpv5Zea mays1E-5527940550 (0)_
v1_GRMZM2G002427_P01 4a53Zea mays1E-5527940550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) LRR_4(4) LRR_6(4) LRR_8(2)
TargetP: Chloroplast (Class 4 C0.835; M0.017; S0.061; _0.518)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 307 aa (-cTP 291)
Molecular Weight 35.15 kDA(-cTP 33.56)
PI 4.96(-cTP 4.96)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help