PPDB

The Plant Proteome Database

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AT4G05460.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05497.1 11Arabidopsis thaliana2E-8423758720 (0)C
AT4G05475.1 11Arabidopsis thaliana6E-8325752680 (0)_
AT4G05490.1 11Arabidopsis thaliana6E-8027055670 (0)C
Os02g21240.1 7Oryza sativa2E-5225538610 (0)_
Os02g21260.1 7Oryza sativa1E-4924841590 (0)_
Os08g09450.1 7Oryza sativa8E-4728439530 (0)C
GRMZM2G002427_P01 3.21Zea mays3E-5626940570 (0)_
Zm00001eb354560_P001 agpv5Zea mays3E-5626940570 (0)_
v1_GRMZM2G002427_P01 4a53Zea mays3E-5626940570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) LRR_1(4) LRR_4(3) LRR_6(4) LRR_8(1)
TargetP: Chloroplast (Class 5 C0.768; M0.024; S0.124; _0.629)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 302 aa (-cTP 293)
Molecular Weight 34.16 kDA(-cTP 33.34)
PI 4.56(-cTP 4.56)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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