PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G05410.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21130.1 11Arabidopsis thaliana050363750 (0)_
AT3G18130.1 11Arabidopsis thaliana9E-172952445141 (104)_
AT1G48630.1 11Arabidopsis thaliana9E-162942443106 (74)_
Os03g42770.1 7Oryza sativa4E-16649052712 (2)M
Os05g47890.1 7Oryza sativa1E-14300254229 (29)_
Os01g49290.1 7Oryza sativa1E-14302244277 (77)_
Zm00001eb050650_P001 agpv5Zea mays1E-16843154710 (0)_
GRMZM2G015005_P03 3.21Zea mays1E-16843154711 (1)_
Zm00001eb218720_P002 agpv5Zea mays2E-16748951690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) CDC27(1) Ge1_WD40(3) Nop14(1) Nup160(3) WD40(6)
TargetP: Cytoplasm (Class 2 C0.144; M0.086; S0.115; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 504 aa (-cTP 489)
Molecular Weight 56.52 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1507Detail        [A. thaliana] wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help