PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G05370.1   BCS1 AAA-type ATPase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G43910.1); Has 118 Blast hits to 116 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.10)
Links TAIR   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05380.1 11Arabidopsis thaliana9E-1021491001000 (0)S
AT1G43910.1 11Arabidopsis thaliana7E-5113558780 (0)S
AT2G18190.1 11Arabidopsis thaliana1E-0914131520 (0)S
Os05g51130.1 7Oryza sativa3E-0713426470 (0)S
GRMZM6G704070_P01 3.21Zea mays1E-0813226500 (0)S
Zm00001eb297510_P001 agpv5Zea mays1E-0813226500 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Secreted (Class 2 C0.001; M0.069; S0.967; _0.210)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 149 aa (-cTP 138)
Molecular Weight 17.23 kDA(-cTP )
PI 9.30(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help