PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G05330.1   ARF-GAP domain 13
Lab Annot. ARF GAP domain (AGD)
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05330.3 11Arabidopsis thaliana03361001000 (0)_
AT4G05330.2 11Arabidopsis thaliana029799990 (0)S
AT4G21160.2 11Arabidopsis thaliana033786923 (1)_
Os06g40704.1 7Oryza sativa9E-15132561790 (0)_
Os06g40704.3 7Oryza sativa9E-15132561790 (0)_
Os06g40704.2 7Oryza sativa9E-15132561790 (0)_
GRMZM2G071582_P02 3.21Zea mays1E-15532264820 (0)M
Zm00001eb276170_P001 agpv5Zea mays1E-15532264820 (0)M
v1_GRMZM2G071582_P02 4a53Zea mays1E-15532264820 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ArfGap(2) C2(1) SFTA2(2)
TargetP: Cytoplasm (Class 4 C0.130; M0.349; S0.024; _0.593)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 336 aa (-cTP 332)
Molecular Weight 37.28 kDA(-cTP )
PI 4.96(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help