PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G05310.1   Ubiquitin-like superfamily protein

Lab Annot. Ubiquitin-like protein
Mapman: 29.5.11 protein.degradation.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05270.1 11Arabidopsis thaliana6E-5412672800 (0)_
AT4G03360.1 11Arabidopsis thaliana7E-3128437510 (0)_
AT4G02950.1 11Arabidopsis thaliana2E-3028137510 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FLYWCH(2) Pallilysin(2) Rad60-SLD(2) TFIIIC_delta(2) TMEM71(1) ubiquitin(3)
TargetP: Cytoplasm (Class 2 C0.109; M0.057; S0.221; _0.832)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 415 aa (-cTP 389)
Molecular Weight 47.42 kDA(-cTP )
PI 5.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help