PPDB

The Plant Proteome Database

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AT4G05230.1   Ubiquitin-like superfamily protein

Lab Annot. Ubiquitin-like protein
Mapman: 29.5.11 protein.degradation.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05260.1 11Arabidopsis thaliana3E-3925438510 (0)_
AT4G05250.1 11Arabidopsis thaliana6E-356984920 (0)_
AT4G05240.1 11Arabidopsis thaliana3E-3110161740 (0)_
Os12g17840.1 7Oryza sativa2E-177852660 (0)_
Os09g30390.1 7Oryza sativa2E-1521130480 (0)_
v1_GRMZM2G353446_P01 4a53Zea mays1E-2420732490 (0)_
Zm00001eb101690_P001 agpv5Zea mays1E-2420732490 (0)_
GRMZM2G353446_P01 3.21Zea mays1E-2420732490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rad60-SLD(3) ubiquitin(2)
TargetP: Cytoplasm (Class 1 C0.022; M0.100; S0.071; _0.958)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 206 aa (-cTP 115)
Molecular Weight 23.72 kDA(-cTP )
PI 6.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help