PPDB

PPDB	The Plant Proteome Database

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AT4G05020.1 NAD(P)H dehydrogenase B2

Lab Annot.

NDB2 (NAD(P)H DEHYDROGENASE B2); disulfide oxidoreductase
Mapman: 9.2.2 mitochondrial electron transport / ATP synthesis.NADH-DH_type II.external

Curated Location

mitochondria (Pubmed: 18703057 )

TAIR curated location: extrinsic to mitochondrial inner membrane & mitochondrion14671022,16258072

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G05020.2 11 Arabidopsis thaliana 0 619 94 94 16 (16) _
AT4G21490.2 11 Arabidopsis thaliana 0 582 85 91 0 (0) _
AT4G21490.1 11 Arabidopsis thaliana 0 583 85 91 0 (0) _
Os06g47000.1 7 Oryza sativa 0 572 66 80 0 (0) M
Os06g47000.2 7 Oryza sativa 0 572 66 80 0 (0) M
Os05g26660.1 7 Oryza sativa 0 580 63 78 0 (0) M
v1_GRMZM2G090487_P01 4a53 Zea mays 0 533 70 82 2 (0) M
Zm00001eb151430_P001 agpv5 Zea mays 0 583 65 78 0 (0) M
GRMZM2G563190_P02 3.21 Zea mays 0 583 65 78 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DAO(3) EF-hand_1(1) EF-hand_5(1) EF-hand_6(2) EF-hand_7(1) EF-hand_8(1) NAD_bind
TargetP:	Cytoplasm (Class 4 C0.021; M0.430; S0.040; _0.644)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	582 aa (-cTP 519)
Molecular Weight	65.06 kDA(-cTP )
PI	8.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1123	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1617	Detail								[A. thaliana]		m48
1618	Detail								[A. thaliana]		m48
1619	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data