PPDB

The Plant Proteome Database

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AT4G05000.1   Vacuolar protein sorting-associated protein VPS28 family protein

Lab Annot.
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G05000.3 11Arabidopsis thaliana3E-1572101001000 (0)_
AT4G05000.2 11Arabidopsis thaliana3E-1572101001000 (0)_
AT4G21560.1 11Arabidopsis thaliana2E-13420990960 (0)_
Os01g57260.1 7Oryza sativa4E-9021361822 (2)_
GRMZM5G809184_P01 3.21Zea mays2E-8821361813 (3)_
Zm00001eb369840_P001 agpv5Zea mays2E-8821361810 (0)_
v1_GRMZM2G004749_P01 4a53Zea mays2E-8821361811 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: VPS28(1)
TargetP: Cytoplasm (Class 2 C0.040; M0.141; S0.090; _0.938)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 183)
Molecular Weight 23.69 kDA(-cTP )
PI 5.34(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help