PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G04950.1 thioredoxin family protein

Lab Annot.

thioredoxin protein
Mapman: 21.1 redox.thioredoxin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G32580.1 11 Arabidopsis thaliana 7E-98 161 91 93 0 (0) _
AT3G15660.1 11 Arabidopsis thaliana 4E-30 107 45 68 82 (64) M
AT3G15660.2 11 Arabidopsis thaliana 4E-30 107 45 68 81 (63) M
Os10g35720.1 7 Oryza sativa 0 493 67 78 30 (30) _
Os10g35720.2 7 Oryza sativa 6E-170 386 64 74 28 (28) _
Os03g63420.1 7 Oryza sativa 3E-28 98 46 74 39 (39) C
v1_GRMZM2G090736_P01 4a53 Zea mays 0 496 66 79 4 (4) C
GRMZM2G090736_P01 3.21 Zea mays 0 496 66 79 8 (8) C
v1_GRMZM2G131769_P01 4a53 Zea mays 0 494 66 79 6 (6) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5612(3) Glutaredoxin(4) HyaE(1) SH3BGR(3) Thioredoxin(1) Thioredoxin_2(1) Thi
TargetP:	Cytoplasm (Class 2 C0.116; M0.091; S0.092; _0.770)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	488 aa (-cTP 429)
Molecular Weight	53.11 kDA(-cTP )
PI	5.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data