PPDB

PPDB	The Plant Proteome Database

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AT4G04940.1 transducin family protein / WD-40 repeat family protein

Lab Annot.

transducin protein / WD-40 repeat protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G04940.2 11 Arabidopsis thaliana 0 796 100 100 0 (0) _
AT1G61210.3 11 Arabidopsis thaliana 2E-14 270 25 47 0 (0) _
AT1G61210.2 11 Arabidopsis thaliana 3E-14 270 25 47 0 (0) _
Os06g43690.1 7 Oryza sativa 0 913 69 83 0 (0) _
Os01g57210.1 7 Oryza sativa 3E-13 214 28 46 0 (0) _
Os01g57210.2 7 Oryza sativa 3E-13 214 28 46 0 (0) _
Zm00001eb386980_P002 agpv5 Zea mays 0 913 69 82 0 (0) _
GRMZM2G087712_P01 3.21 Zea mays 0 913 69 82 1 (1) _
v1_GRMZM2G087712_P01 4a53 Zea mays 0 913 69 82 17 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(8) DUF4196(2) Ge1_WD40(4) SHD1(3) Utp21(1) VID27(3) WD40(8) WD40_lik
TargetP:	Cytoplasm (Class 3 C0.179; M0.178; S0.170; _0.643)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	910 aa (-cTP 879)
Molecular Weight	102.22 kDA(-cTP )
PI	6.49(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data