PPDB

The Plant Proteome Database

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AT4G04930.1   fatty acid desaturase family protein

Lab Annot.
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g42660.1 7Oryza sativa032377870 (0)_
Zm00001eb075800_P001 agpv5Zea mays031976850 (0)_
GRMZM2G078373_P01 3.21Zea mays031976850 (0)_
v1_GRMZM2G078373_P01 4a53Zea mays031976850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FA_desaturase(1) Lipid_DES(1)
TargetP: Cytoplasm (Class 2 C0.024; M0.167; S0.024; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 332 aa (-cTP 322)
Molecular Weight 38.51 kDA(-cTP )
PI 7.29(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help