PPDB

The Plant Proteome Database

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AT4G04730.1   Ta11-like non-LTR retrotransposon

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G13500.1 11Arabidopsis thaliana2E-4314057610 (0)_
AT2G13510.1 11Arabidopsis thaliana2E-4310367811 (0)_
AT2G31590.1 11Arabidopsis thaliana8E-3811460760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 3 C0.748; M0.065; S0.021; _0.323)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 140 aa (-cTP 75)
Molecular Weight 15.49 kDA(-cTP 8.44)
PI 10.32(-cTP 10.27)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help