PPDB

The Plant Proteome Database

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AT4G04650.1   RNA-directed DNA polymerase (reverse transcriptase)-related family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G43730.1 11Arabidopsis thaliana7E-13929168760 (0)S
AT5G16486.1 11Arabidopsis thaliana6E-6819654660 (0)_
AT5G28615.1 11Arabidopsis thaliana5E-6014560770 (0)_
Os12g38020.1 7Oryza sativa5E-1526727400 (0)_
Os11g36880.1 7Oryza sativa3E-1424429420 (0)_
Os05g01390.1 7Oryza sativa4E-1318630440 (0)_
Zm00001eb291430_P001 agpv5Zea mays1E-1024123390 (0)_
Zm00001eb279530_P001 agpv5Zea mays2E-1026729400 (0)M
GRMZM2G039683_P04 3.21Zea mays2E-0614228420 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pkinase(1) zf-RVT(1)
TargetP: Cytoplasm (Class 5 C0.039; M0.197; S0.166; _0.211)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 332 aa (-cTP 276)
Molecular Weight 37.94 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16923014(cold-stress responsive chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help