PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G04460.1   Saposin-like aspartyl protease family protein
Lab Annot. Saposin-like aspartyl protease protein
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G04460.2 11Arabidopsis thaliana0508999930 (29)S
AT1G11910.1 11Arabidopsis thaliana05026581645 (496)S
AT1G11910.2 11Arabidopsis thaliana050265810 (0)S
Os01g47410.2 7Oryza sativa049462770 (0)S
Os01g47410.1 7Oryza sativa049462770 (0)S
Os05g49200.1 7Oryza sativa0484628049 (49)S
Zm00001eb343950_P001 agpv5Zea mays048561800 (0)S
Zm00001eb343950_P002 agpv5Zea mays048561800 (0)S
Zm00001eb343950_P003 agpv5Zea mays048561800 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Asp(1) Asp_protease_2(1) SapB_1(1) SapB_2(1) TAXi_C(1) TAXi_N(1)
TargetP: Secreted (Class 1 C0.018; M0.023; S0.941; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 508 aa (-cTP 440)
Molecular Weight 55.57 kDA(-cTP )
PI 6.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help