PPDB

PPDB	The Plant Proteome Database

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AT4G04370.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03580.1 11 Arabidopsis thaliana 2E-132 721 32 54 0 (0) C
AT4G13650.1 11 Arabidopsis thaliana 1E-131 714 31 53 1 (1) _
AT1G11290.1 11 Arabidopsis thaliana 3E-128 688 32 55 1 (1) C
Os03g56850.1 7 Oryza sativa 5E-146 701 35 56 0 (0) M
Os01g10800.1 7 Oryza sativa 1E-121 730 31 53 2 (2) C
Os12g36620.1 7 Oryza sativa 1E-121 689 31 53 0 (0) _
Zm00001eb213580_P002 agpv5 Zea mays 6E-145 688 35 56 0 (0) _
Zm00001eb213580_P001 agpv5 Zea mays 1E-144 688 35 56 0 (0) _
GRMZM5G892151_P01 3.21 Zea mays 9E-144 724 34 55 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(4) PPR(14) PPR_1(12) PPR_2(13) PPR_3(11) PPR_long(5) RNPP_C(4) TPR_15(1)
TargetP:	Cytoplasm (Class 4 C0.227; M0.071; S0.017; _0.466)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	729 aa (-cTP 656)
Molecular Weight	81.21 kDA(-cTP )
PI	6.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data