PPDB

The Plant Proteome Database

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AT4G04320.1   malonyl-CoA decarboxylase family protein

Lab Annot. malonyl-CoA decarboxylase (MCD) - dually targeted mitochondria & peroxisome
Mapman: 11.1.20 lipid metabolism.FA synthesis and FA elongation.MCD
Curated Location mitochondria (Pubmed: 19036033 21472859 )
peroxisome (Pubmed: 19036033 21472859 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G04320.2 11Arabidopsis thaliana051899991 (1)M
Os09g23070.2 7Oryza sativa044261750 (0)M
Os09g23070.1 7Oryza sativa044261750 (0)M
Zm00001eb099100_P001 agpv5Zea mays044761760 (0)C
GRMZM2G043501_P01 3.21Zea mays044761761 (0)C
v1_GRMZM2G043501_P01 4a53Zea mays042561760 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MCD(1) MCD_N(1)
TargetP: Mitochondria (Class 4 C0.419; M0.669; S0.015; _0.033)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 518 aa (-cTP 507)
Molecular Weight 58.45 kDA(-cTP )
PI 6.91(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19329564(peroxisomes (leaf))
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help