PPDB

The Plant Proteome Database

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AT4G04210.1   plant UBX domain containing protein 4

Lab Annot. UBX domain protein
Mapman: 35 not assigned
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G22150.1 11Arabidopsis thaliana5E-16430778870 (0)_
AT4G15410.1 11Arabidopsis thaliana1E-10830958704 (0)_
AT3G21660.2 11Arabidopsis thaliana2E-5019648600 (0)_
Os04g39040.1 7Oryza sativa6E-114313587014 (14)_
Os06g42810.1 7Oryza sativa3E-10029651700 (0)_
Zm00001eb080480_P001 agpv5Zea mays9E-10131855680 (0)_
GRMZM2G134539_P01 3.21Zea mays2E-9430354685 (5)_
v1_GRMZM2G134539_P01 4a53Zea mays2E-9430354686 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SEP(2) UBX(1)
TargetP: Cytoplasm (Class 3 C0.191; M0.120; S0.055; _0.707)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 303 aa (-cTP 292)
Molecular Weight 32.90 kDA(-cTP )
PI 5.66(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help