PPDB

The Plant Proteome Database

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AT4G04200.1   Microsomal signal peptidase 25 kDa subunit (SPC25)

Lab Annot. microsomal signal peptidase 25 kDa subunit (regulator?)
Mapman: 29.5.5.6.1* protein.degradation.serine protease.SF.S26
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G39960.1 11Arabidopsis thaliana3E-105197808455 (55)_
Os02g35720.1 7Oryza sativa2E-6217259700 (0)_
Os04g36859.1 7Oryza sativa1E-59176617318 (18)_
Os04g36859.2 7Oryza sativa2E-4315159721 (1)_
v1_GRMZM2G131321_P01 4a53Zea mays1E-59170637518 (17)_
Zm00001eb081650_P001 agpv5Zea mays1E-5917063750 (0)_
GRMZM2G131321_P01 3.21Zea mays1E-59170637523 (23)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SPC25(1)
TargetP: Cytoplasm (Class 3 C0.018; M0.118; S0.237; _0.831)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 190 aa (-cTP 162)
Molecular Weight 21.23 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16247729(mature Pollen)
19546170(mature pollen grains)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help