PPDB

The Plant Proteome Database

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AT4G03550.1   glucan synthase-like 5

Lab Annot. glucan synthase-like 5
Mapman: 3.6 minor CHO metabolism.callose
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G04970.1 11Arabidopsis thaliana0177664790 (0)_
AT2G13680.1 11Arabidopsis thaliana0179347644 (3)C
AT5G13000.1 11Arabidopsis thaliana0180946645 (5)M
Os01g55040.1 7Oryza sativa0177863790 (0)M
Os06g08380.1 7Oryza sativa0180147630 (0)C
Os03g03610.1 7Oryza sativa0174445630 (0)M
Zm00001eb157150_P001 agpv5Zea mays0179364780 (0)M
Zm00001eb157150_P002 agpv5Zea mays0179364780 (0)M
Zm00001eb152900_P002 agpv5Zea mays0177763780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FKS1_dom1(1) Glucan_synthase(2) UCR_UQCRX_QCR9(2)
TargetP: Cytoplasm (Class 4 C0.039; M0.420; S0.029; _0.776)
Predotar:
Subcel. Location:
TM-HMM prediction: 12 TMs
Aramemnon: 14 TMs
TAT position:
Length 1780 aa (-cTP 1764)
Molecular Weight 206.91 kDA(-cTP )
PI 9.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20706207(contaminants cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21826108(SYP trans-Golgi-filtered)
21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
22430844(Golgi-cell-culture)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
21515685(GreenCut2)

Comparative Proteomics Data


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