PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G03540.1   Uncharacterized protein family (UPF0497)

Lab Annot. integral membrane protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03700.1 11Arabidopsis thaliana4E-9716483930 (0)S
AT5G15290.1 11Arabidopsis thaliana1E-2014636530 (0)_
AT1G14160.1 11Arabidopsis thaliana6E-2015536550 (0)_
Os05g15630.1 7Oryza sativa4E-3715246690 (0)S
Os01g13560.1 7Oryza sativa4E-2212539650 (0)S
Os08g01160.1 7Oryza sativa1E-2015139590 (0)_
GRMZM2G038780_P01 3.21Zea mays4E-3516149670 (0)S
Zm00001eb347520_P001 agpv5Zea mays4E-3516149670 (0)S
v1_GRMZM2G038780_P01 4a53Zea mays4E-3516149670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF588(1)
TargetP: Secreted (Class 5 C0.000; M0.613; S0.792; _0.020)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 164 aa (-cTP 150)
Molecular Weight 17.67 kDA(-cTP )
PI 9.62(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help