PPDB

The Plant Proteome Database

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AT4G03320.1   translocon at the inner envelope membrane of chloroplasts 20-IV

Lab Annot. Tic20-IV (group 1)- dual targeted plastid and mito's
Mapman: 29.3.3 protein.targeting.chloroplast
Curated Location envelope-inner-integral (Pubmed: 23198870 21874592 21395885 18431481 )
mitochondria (Pubmed: 23198870 21874592 21395885 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04940.1 11Arabidopsis thaliana8E-5118943640 (0)C
AT1G04945.3 11Arabidopsis thaliana4E-4016943632 (2)C
Os07g38110.2 7Oryza sativa1E-3619736550 (0)C
Os07g38110.1 7Oryza sativa1E-3619736550 (0)C
Os02g40080.1 7Oryza sativa1E-3416637600 (0)M
Zm00001eb247090_P003 agpv5Zea mays2E-3727932490 (0)_
v1_GRMZM2G097015_P01 4a53Zea mays2E-3727932490 (0)_
GRMZM2G097015_P02 3.21Zea mays2E-3727932490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1201(2) DUF2417(1) TIC20(1)
TargetP: Chloroplast (Class 4 C0.611; M0.324; S0.000; _0.112)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 284 aa (-cTP 236) (-lTP 217)
Molecular Weight 32.52 kDA(-cTP 27.26)(-lTP 25.29)
PI 9.75(-cTP 9.32)(-lTP 9.166)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help