PPDB

PPDB	The Plant Proteome Database

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AT4G03190.1 GRR1-like protein 1

Lab Annot.

GRH1 (GRR1-LIKE PROTEIN 1); ubiquitin-protein ligase
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

TAIR curated location: nucleus15992545

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G62980.1 11 Arabidopsis thaliana 0 575 70 83 0 (0) _
AT1G12820.1 11 Arabidopsis thaliana 0 571 55 73 0 (0) _
AT3G26810.1 11 Arabidopsis thaliana 0 573 55 73 0 (0) _
Os04g32460.2 7 Oryza sativa 0 570 57 72 0 (0) _
Os04g32460.1 7 Oryza sativa 0 570 57 72 0 (0) _
Os05g05800.1 7 Oryza sativa 0 561 60 74 0 (0) _
GRMZM2G135978_P01 3.21 Zea mays 0 568 60 74 0 (0) _
v1_GRMZM2G135978_P01 4a53 Zea mays 0 568 60 74 0 (0) _
Zm00001eb354200_P001 agpv5 Zea mays 0 568 60 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	F-box(2) F-box-like(2) F-box_5(1) LPD37(1) LRR_1(2) LRR_3(1) LRR_4(4) LRR_6(6) T
TargetP:	Cytoplasm (Class 5 C0.476; M0.032; S0.056; _0.628)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	585 aa (-cTP 532)
Molecular Weight	65.65 kDA(-cTP )
PI	8.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2287	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data