PPDB

 The Plant Proteome Database

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AT4G03110.1   RNA-binding protein-defense related 1
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G03110.3 11Arabidopsis thaliana039899990 (0)_
AT4G03110.2 11Arabidopsis thaliana0398989910 (0)_
AT1G03457.1 11Arabidopsis thaliana042272830 (0)_
Os01g71200.1 7Oryza sativa5E-17942363767 (7)_
Os05g30980.1 7Oryza sativa1E-17342562761 (1)_
Os05g30980.2 7Oryza sativa3E-15440260731 (1)_
GRMZM2G005459_P01 3.21Zea mays1E-17943261751 (1)_
Zm00001eb363310_P001 agpv5Zea mays1E-17943261750 (0)_
v1_GRMZM2G005459_P01 4a53Zea mays1E-17943261752 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BRAP2(3) Golgin_A5(1) RNA_bind(3) RRM_1(3) RRM_5(3) RRM_7(3)
TargetP: Cytoplasm (Class 2 C0.146; M0.111; S0.048; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 441 aa (-cTP 438)
Molecular Weight 48.20 kDA(-cTP )
PI 8.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help