PPDB

PPDB	The Plant Proteome Database

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AT4G03020.1 transducin family protein / WD-40 repeat family protein

Lab Annot.

transducin protein / WD-40 repeat protein
Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G03020.3 11 Arabidopsis thaliana 0 493 100 100 0 (0) _
AT4G03020.2 11 Arabidopsis thaliana 0 493 100 100 21 (7) _
AT2G43770.1 11 Arabidopsis thaliana 1E-18 280 23 41 4 (2) C
Os05g33710.1 7 Oryza sativa 0 459 61 77 0 (0) _
Os05g05210.1 7 Oryza sativa 0 423 64 78 0 (0) _
Os05g05210.2 7 Oryza sativa 0 423 64 78 0 (0) _
Zm00001eb349670_P002 agpv5 Zea mays 0 458 60 77 0 (0) _
Zm00001eb354420_P005 agpv5 Zea mays 0 421 62 76 0 (0) C
Zm00001eb354420_P002 agpv5 Zea mays 0 421 62 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(5) Cytochrom_D1(3) eIF2A(4) PQQ_3(2) WD40(6) WD40_like(4)
TargetP:	Cytoplasm (Class 1 C0.058; M0.065; S0.042; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	493 aa (-cTP 405)
Molecular Weight	55.41 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2286	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2302	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data