PPDB

PPDB	The Plant Proteome Database

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AT4G03000.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G03000.2 11 Arabidopsis thaliana 0 814 100 100 1 (1) _
AT4G03000.6 11 Arabidopsis thaliana 0 638 99 99 0 (0) _
AT4G03000.4 11 Arabidopsis thaliana 0 638 99 99 0 (0) _
Os05g04950.1 7 Oryza sativa 1E-102 781 33 52 0 (0) C
Os05g04950.2 7 Oryza sativa 1E-102 781 33 52 0 (0) C
Os09g20550.1 7 Oryza sativa 5E-40 349 30 54 0 (0) M
GRMZM2G102243_P01 3.21 Zea mays 4E-102 772 33 52 0 (0) C
Zm00001eb320610_P004 agpv5 Zea mays 4E-102 772 33 52 0 (0) C
Zm00001eb320610_P001 agpv5 Zea mays 4E-102 772 33 52 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_4(1) zf-RING_5(1)
TargetP:	Cytoplasm (Class 4 C0.510; M0.044; S0.015; _0.809)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	814 aa (-cTP 747)
Molecular Weight	90.16 kDA(-cTP )
PI	8.92(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1262	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data