PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G02980.1 endoplasmic reticulum auxin binding protein 1

Lab Annot.

ABP1 (ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1)
Mapman: 17.2.2 hormone metabolism.auxin.signal transduction

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os12g34450.1 7 Oryza sativa 3E-55 124 65 79 0 (0) _
Os12g34460.2 7 Oryza sativa 4E-45 132 54 71 0 (0) M
GRMZM2G078508_P01 3.21 Zea mays 2E-75 164 64 78 3 (3) M
Zm00001eb410800_P001 agpv5 Zea mays 2E-75 164 64 78 0 (0) M
v1_GRMZM2G078508_P01 4a53 Zea mays 2E-75 164 64 78 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Auxin_BP(1) Cupin_1(1) Cupin_2(1) Cupin_7(1) DMSP_lyase(1)
TargetP:	Secreted (Class 1 C0.035; M0.015; S0.975; _0.024)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	198 aa (-cTP 195)
Molecular Weight	22.04 kDA(-cTP )
PI	5.51(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data