PPDB

The Plant Proteome Database

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AT4G02980.1   endoplasmic reticulum auxin binding protein 1

Lab Annot. ABP1 (ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1)
Mapman: 17.2.2 hormone metabolism.auxin.signal transduction
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os12g34450.1 7Oryza sativa3E-5512465790 (0)_
Os12g34460.2 7Oryza sativa4E-4513254710 (0)M
GRMZM2G078508_P01 3.21Zea mays2E-7516464783 (3)M
Zm00001eb410800_P001 agpv5Zea mays2E-7516464780 (0)M
v1_GRMZM2G078508_P01 4a53Zea mays2E-7516464782 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_BP(1) Cupin_1(1) Cupin_2(1) Cupin_7(1) DMSP_lyase(1)
TargetP: Secreted (Class 1 C0.035; M0.015; S0.975; _0.024)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 198 aa (-cTP 195)
Molecular Weight 22.04 kDA(-cTP )
PI 5.51(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


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