PPDB

The Plant Proteome Database

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AT4G02860.1   Phenazine biosynthesis PhzC/PhzF protein

Lab Annot. Phenazine biosynthesis PhzC/PhzF protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03210.1 11Arabidopsis thaliana6E-14829470810 (0)S
AT1G03210.2 11Arabidopsis thaliana2E-14332164740 (0)S
AT4G02850.1 11Arabidopsis thaliana6E-13131361740 (0)S
Os01g16146.1 7Oryza sativa8E-9130848630 (0)S
Os03g32040.1 7Oryza sativa5E-6528839580 (0)_
Zm00001eb333190_P001 agpv5Zea mays8E-9530050670 (0)_
GRMZM2G050325_P01 3.21Zea mays8E-95300506714 (14)_
v1_GRMZM2G050325_P01 4a53Zea mays8E-95300506711 (11)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DAP_epimerase(3) PhzC-PhzF(1)
TargetP: Cytoplasm (Class 1 C0.044; M0.133; S0.092; _0.979)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 313 aa (-cTP 281)
Molecular Weight 34.32 kDA(-cTP )
PI 5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help