PPDB

PPDB	The Plant Proteome Database

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AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G02150.1 11 Arabidopsis thaliana 5E-82 449 34 57 169 (64) M
AT1G60770.1 11 Arabidopsis thaliana 5E-75 438 32 54 2 (1) _
AT5G27460.1 11 Arabidopsis thaliana 4E-74 493 31 54 2 (2) C
Os12g34340.1 7 Oryza sativa 0 472 51 73 0 (0) M
Os04g46010.1 7 Oryza sativa 1E-82 428 34 57 31 (31) C
Os01g19490.1 7 Oryza sativa 2E-78 431 32 57 1 (1) S
GRMZM2G105229_P02 3.21 Zea mays 2E-170 475 48 70 0 (0) M
Zm00001eb410850_P001 agpv5 Zea mays 2E-170 475 48 70 0 (0) M
v1_GRMZM2G105229_P02 4a53 Zea mays 2E-170 475 48 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4363(1) PPR(10) PPR_1(6) PPR_2(9) PPR_3(5) PPR_long(4) TPR_1(4) TPR_2(4)
TargetP:	Mitochondria (Class 4 C0.043; M0.600; S0.212; _0.033)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	532 aa (-cTP 492)
Molecular Weight	60.13 kDA(-cTP )
PI	9.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data