PPDB

 The Plant Proteome Database

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AT4G02790.1   GTP-binding family protein
Lab Annot. GTP-binding protein
Mapman: 30.5 signalling.G-proteins
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41670.1 11Arabidopsis thaliana1E-2622632508 (8)_
AT3G07050.1 11Arabidopsis thaliana6E-19288294515 (7)_
AT1G52980.1 11Arabidopsis thaliana5E-1528224450 (0)_
Os05g35540.1 7Oryza sativa3E-17231172868 (8)C
Os11g26030.1 7Oryza sativa1E-2522430500 (0)M
Os01g27730.1 7Oryza sativa2E-1828627454 (4)_
GRMZM2G077662_P01 3.21Zea mays2E-166301728646 (43)C
Zm00001eb289310_P001 agpv5Zea mays2E-16630172860 (0)C
v1_GRMZM2G077662_P01 4a53Zea mays2E-166301728629 (29)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AIG1(1) Dynamin_N(2) FeoB_N(2) MMR_HSR1(2) Roc(1) RsgA_GTPase(2)
TargetP: Chloroplast (Class 3 C0.827; M0.276; S0.037; _0.041)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 372 aa (-cTP 339)
Molecular Weight 41.72 kDA(-cTP 38.05)
PI 9.83(-cTP 9.75)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1196Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1672Detail        [A. thaliana]  
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help