PPDB

The Plant Proteome Database

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AT4G02660.1   Beige/BEACH and WD40 domain-containing protein

Lab Annot. WD-40 repeat protein / beige-related
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02660.3 11Arabidopsis thaliana035271001000 (0)_
AT4G02660.2 11Arabidopsis thaliana0357698980 (0)_
AT1G03060.1 11Arabidopsis thaliana0361377864 (4)C
Os03g53280.1 7Oryza sativa0356760744 (4)C
Os02g06720.1 7Oryza sativa4E-10867136512 (2)_
Os02g44380.2 7Oryza sativa2E-8657434500 (0)_
Zm00001eb056940_P001 agpv5Zea mays0363959740 (0)C
GRMZM2G056645_P01 3.21Zea mays0215163772 (1)C
v1_GRMZM2G150183_P01 4a53Zea mays0215663770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Beach(1) DUF4704(4) Laminin_G_3(1) PH_BEACH(2) WD40(4)
TargetP: Cytoplasm (Class 3 C0.158; M0.045; S0.040; _0.749)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 3527 aa (-cTP 3447)
Molecular Weight 393.32 kDA(-cTP )
PI 5.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
541Detail       leaf [A. thaliana] stroma (FPLC) >1 MDa stromawild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(trichomes)
18431481(chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help