PPDB

PPDB	The Plant Proteome Database

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AT4G02660.1 Beige/BEACH and WD40 domain-containing protein

Lab Annot.

WD-40 repeat protein / beige-related
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G02660.3 11 Arabidopsis thaliana 0 3527 100 100 0 (0) _
AT4G02660.2 11 Arabidopsis thaliana 0 3576 98 98 0 (0) _
AT1G03060.1 11 Arabidopsis thaliana 0 3613 77 86 4 (4) C
Os03g53280.1 7 Oryza sativa 0 3567 60 74 4 (4) C
Os02g06720.1 7 Oryza sativa 4E-108 671 36 51 2 (2) _
Os02g44380.2 7 Oryza sativa 2E-86 574 34 50 0 (0) _
Zm00001eb056940_P001 agpv5 Zea mays 0 3639 59 74 0 (0) C
GRMZM2G056645_P01 3.21 Zea mays 0 2151 63 77 1 (1) C
v1_GRMZM2G150183_P01 4a53 Zea mays 0 2156 63 77 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beach(1) DUF4704(4) Laminin_G_3(1) PH_BEACH(2) WD40(4)
TargetP:	Cytoplasm (Class 3 C0.158; M0.045; S0.040; _0.749)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	3527 aa (-cTP 3447)
Molecular Weight	393.32 kDA(-cTP )
PI	5.95(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
541	Detail								leaf [A. thaliana]	stroma (FPLC) >1 MDa stroma	wild-type
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(trichomes)
18431481(chloroplast)

Comparative Proteomics Data