PPDB

 The Plant Proteome Database

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AT4G02610.1   Aldolase-type TIM barrel family protein
Lab Annot. tryptophan synthase, alpha subunit, putative
Mapman: 13.1.6.5.5 amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
Curated Location cytosol (Pubmed: 18844775 )

TAIR curated location: chloroplast7890741
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G54640.1 11Arabidopsis thaliana2E-1422747586249 (186)C
Os03g58260.2 7Oryza sativa4E-13526271860 (0)_
Os03g58260.1 7Oryza sativa4E-13526271860 (0)_
Os07g08430.1 7Oryza sativa8E-133261748642 (42)C
Zm00001eb301540_P002 agpv5Zea mays2E-14226172870 (0)M
Zm00001eb301540_P001 agpv5Zea mays4E-14226172870 (0)M
GRMZM5G841619_P01 3.21Zea mays4E-142261728767 (62)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BtpA(1) CbiX(1) FMN_dh(1) Glyco_tran_WecB(2) His_biosynth(1) IGPS(2) NanE(1) NMO
TargetP: Cytoplasm (Class 3 C0.123; M0.149; S0.119; _0.688)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 275 aa (-cTP 254)
Molecular Weight 29.58 kDA(-cTP )
PI 5.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

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