PPDB

The Plant Proteome Database

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AT4G02560.1   Homeodomain-like superfamily protein

Lab Annot. Homeodomain-like protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
TAIR curated location: nucleus10363371
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02560.2 11Arabidopsis thaliana09531001001 (1)_
Os01g70810.1 7Oryza sativa2E-18084642570 (0)_
Zm00001eb142180_P004 agpv5Zea mays5E-16785739550 (0)_
Zm00001eb142180_P003 agpv5Zea mays9E-16785639550 (0)_
Zm00001eb142180_P001 agpv5Zea mays7E-15885738550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Homeodomain(2)
TargetP: Cytoplasm (Class 1 C0.033; M0.117; S0.135; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 953 aa (-cTP 900)
Molecular Weight 105.41 kDA(-cTP )
PI 8.80(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19452453(14-3-3-interacting proteins)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help