PPDB

PPDB	The Plant Proteome Database

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AT4G02400.1 U3 ribonucleoprotein (Utp) family protein

Lab Annot.

Mapman: 27.1.1 RNA.processing.splicing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08600.2 11 Arabidopsis thaliana 0 855 69 80 0 (0) C
AT5G08600.1 11 Arabidopsis thaliana 0 835 70 81 0 (0) C
AT5G08600.3 11 Arabidopsis thaliana 0 630 68 80 0 (0) C
Os03g22320.1 7 Oryza sativa 0 832 50 66 2 (2) _
Zm00001eb016440_P001 agpv5 Zea mays 0 859 45 64 0 (0) _
Zm00001eb016440_P002 agpv5 Zea mays 0 862 46 64 0 (0) _
v1_GRMZM2G158676_P01 4a53 Zea mays 3E-114 625 41 60 13 (13) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Utp14(2)
TargetP:	Cytoplasm (Class 4 C0.269; M0.190; S0.070; _0.551)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	855 aa (-cTP 843)
Molecular Weight	96.76 kDA(-cTP )
PI	5.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)

Comparative Proteomics Data