PPDB

 The Plant Proteome Database

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AT4G02370.1   pectinesterase (Protein of unknown function%2C DUF538)
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G02816.1 11Arabidopsis thaliana1E-8116671805 (5)S
AT4G02360.1 11Arabidopsis thaliana9E-48146536510 (10)S
AT1G02813.1 11Arabidopsis thaliana3E-3913945660 (0)S
Os05g29900.1 7Oryza sativa4E-5112758740 (0)S
Os05g29920.1 7Oryza sativa1E-4913555670 (0)S
Os11g13750.1 7Oryza sativa1E-3115238534 (4)S
Zm00001eb346540_P001 agpv5Zea mays2E-4813456660 (0)S
GRMZM2G023520_P01 3.21Zea mays2E-4813456667 (7)M
v1_GRMZM2G023520_P01 4a53Zea mays2E-4813456668 (8)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF538(1)
TargetP: Secreted (Class 1 C0.044; M0.023; S0.971; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 167 aa (-cTP 145)
Molecular Weight 18.36 kDA(-cTP )
PI 5.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2296Detail        [A. thaliana] Clp C1 WT
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 15539469(vacuole)
17151019(vacuole - suspension cell)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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