PPDB

PPDB	The Plant Proteome Database

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AT4G02350.1 exocyst complex component sec15B

Lab Annot.

exocyst complex subunit Sec15-like protein
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G02350.2 11 Arabidopsis thaliana 0 787 100 100 0 (0) _
AT3G56640.1 11 Arabidopsis thaliana 0 809 46 66 0 (0) _
Os01g24950.1 7 Oryza sativa 0 786 57 73 12 (12) _
Os01g24950.2 7 Oryza sativa 0 786 57 73 12 (12) _
Os03g06760.2 7 Oryza sativa 0 778 45 67 0 (0) _
GRMZM5G885285_P01 3.21 Zea mays 0 813 56 72 25 (2) _
v1_GRMZM2G359314_P01 4a53 Zea mays 0 783 47 66 0 (0) _
GRMZM2G359314_P01 3.21 Zea mays 0 783 47 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	COG2(1) COG5(2) DUF2451(3) DUF3510(1) DUF883(1) Exo70(2) Met_synt_B12(2) Sec15(1
TargetP:	Cytoplasm (Class 4 C0.040; M0.398; S0.084; _0.673)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	787 aa (-cTP 777)
Molecular Weight	88.37 kDA(-cTP )
PI	6.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
17432890(leaf total membranes)
19546170(mature pollen grains)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data