PPDB

PPDB	The Plant Proteome Database

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AT4G02340.1 alpha/beta-Hydrolases superfamily protein

Lab Annot.

epoxide hydrolase
Mapman: 26.57* misc.alpha/beta-Hydrolase family

Curated Location

peroxisome (Pubmed: 17951448 21472859 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05600.1 11 Arabidopsis thaliana 6E-140 330 56 71 1 (1) _
AT4G15960.1 11 Arabidopsis thaliana 9E-132 324 54 73 0 (0) M
AT4G15955.3 11 Arabidopsis thaliana 1E-120 323 53 70 0 (0) _
Os05g19150.1 7 Oryza sativa 1E-138 317 57 75 3 (3) _
Os01g15120.1 7 Oryza sativa 3E-138 318 57 74 21 (21) _
Os01g15130.1 7 Oryza sativa 4E-132 309 56 73 0 (0) _
v1_GRMZM2G161658_P01 4a53 Zea mays 1E-137 321 57 72 5 (5) _
Zm00001eb127750_P001 agpv5 Zea mays 1E-137 321 57 72 0 (0) _
GRMZM2G161658_P01 3.21 Zea mays 1E-137 321 57 72 5 (5) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_1(2) Abhydrolase_6(1) Chlorophyllase2(1) Hydrolase_4(2) Ndr(2)
TargetP:	Cytoplasm (Class 2 C0.142; M0.066; S0.063; _0.894)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	324 aa (-cTP 278)
Molecular Weight	36.66 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2290	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data