PPDB

The Plant Proteome Database

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AT4G02290.1   glycosyl hydrolase 9B13

Lab Annot. glycosyl hydrolase 9B13
Mapman: 26.3 misc.gluco-, galacto- and mannosidases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02290.2 11Arabidopsis thaliana04041001000 (0)S
AT1G02800.1 11Arabidopsis thaliana051278860 (0)S
AT1G70710.1 11Arabidopsis thaliana0462637666 (28)S
Os01g21070.1 7Oryza sativa047174860 (0)S
Os02g50040.1 7Oryza sativa046564780 (0)S
Os06g14540.1 7Oryza sativa046363770 (0)S
v1_GRMZM2G331566_P02 4a53Zea mays050270810 (0)S
GRMZM2G331566_P02 3.21Zea mays050270810 (0)S
Zm00001eb340080_P001 agpv5Zea mays050270810 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_9(1)
TargetP: Secreted (Class 1 C0.019; M0.090; S0.920; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 516 aa (-cTP 510)
Molecular Weight 57.30 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2287Detail        [A. thaliana] Clp C1 WT
2291Detail        [A. thaliana] Clp C1 TRAP
2299Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help