PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G02195.1 syntaxin of plants 42

Lab Annot.

Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: trans-Golgi network transport vesicle & Golgi trans face10888666,11115874

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G26980.1 11 Arabidopsis thaliana 2E-144 327 65 78 0 (0) M
AT5G26980.3 11 Arabidopsis thaliana 2E-144 327 65 78 0 (0) M
AT5G26980.2 11 Arabidopsis thaliana 2E-144 327 65 78 0 (0) M
Os06g02570.1 7 Oryza sativa 9E-139 333 63 77 0 (0) M
Os01g15110.1 7 Oryza sativa 2E-07 77 35 63 3 (3) _
Zm00001eb221480_P001 agpv5 Zea mays 4E-142 324 64 78 0 (0) M
GRMZM2G162544_P01 3.21 Zea mays 4E-142 324 64 78 0 (0) M
Zm00001eb120350_P003 agpv5 Zea mays 1E-141 327 64 78 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2417(1) DUF948(2) MCPsignal(2) Peptidase_S64(1) POTRA_2(1) Prominin(2) SNARE(
TargetP:	Mitochondria (Class 4 C0.401; M0.687; S0.004; _0.070)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	323 aa (-cTP 277)
Molecular Weight	36.43 kDA(-cTP )
PI	6.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21826108(SYP trans-Golgi-filtered)

Comparative Proteomics Data