PPDB

The Plant Proteome Database

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AT4G02195.1   syntaxin of plants 42

Lab Annot.
Mapman: 31.4 cell.vesicle transport
Curated Location
TAIR curated location: trans-Golgi network transport vesicle & Golgi trans face10888666,11115874
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G26980.1 11Arabidopsis thaliana2E-14432765780 (0)M
AT5G26980.3 11Arabidopsis thaliana2E-14432765780 (0)M
AT5G26980.2 11Arabidopsis thaliana2E-14432765780 (0)M
Os06g02570.1 7Oryza sativa9E-13933363770 (0)M
Os01g15110.1 7Oryza sativa2E-077735633 (3)_
Zm00001eb221480_P001 agpv5Zea mays4E-14232464780 (0)M
GRMZM2G162544_P01 3.21Zea mays4E-14232464780 (0)M
Zm00001eb120350_P003 agpv5Zea mays1E-14132764780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2417(1) DUF948(2) MCPsignal(2) Peptidase_S64(1) POTRA_2(1) Prominin(2) SNARE(
TargetP: Mitochondria (Class 4 C0.401; M0.687; S0.004; _0.070)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 323 aa (-cTP 277)
Molecular Weight 36.43 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21826108(SYP trans-Golgi-filtered)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help