PPDB

The Plant Proteome Database

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AT4G02030.1   Vps51/Vps67 family (components of vesicular transport) protein

Lab Annot. Vps51/Vps67 family (components of vesicular transport) protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G02030.2 11Arabidopsis thaliana0805969612 (9)_
Os03g52770.1 7Oryza sativa0782577313 (13)C
Zm00001eb215280_P003 agpv5Zea mays078556720 (0)_
v1_GRMZM2G023858_P01 4a53Zea mays078556720 (0)_
GRMZM2G023858_P01 3.21Zea mays0785567210 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: COG2(1) COG5(2) Dor1(2) Pox_D5(3) Sec5(3) Vps51(1)
TargetP: Cytoplasm (Class 3 C0.222; M0.087; S0.056; _0.790)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 780 aa (-cTP 752)
Molecular Weight 88.52 kDA(-cTP )
PI 5.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2288Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help